| AGE DEPENDENT CIRCADIAN CHANGES ADRENAL AGED: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age groups |
Mus musculus |
Kidney |
Aged |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES ADRENAL OLD: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age groups |
Mus musculus |
Kidney |
Old |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES ADRENAL YOUNG: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age groups |
Mus musculus |
Kidney |
Young |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES HEART AGED: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Heart |
Aged |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES HEART OLD: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Heart |
Old |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES HEART YOUNG: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Heart |
Young |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES HYPOTHALAMUS AGED: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Brain |
Aged |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES HYPOTHALAMUS OLD: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Brain |
Old |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES HYPOTHALAMUS YOUNG: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Brain |
Young |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES KIDNEY AGED: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Kidney |
Aged |
GSE201207 |
Kidney |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES KIDNEY OLD: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Kidney |
Old |
GSE201207 |
Kidney |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES KIDNEY YOUNG: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Kidney |
Young |
GSE201207 |
Kidney |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES LUNG AGED: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Lung |
Aged |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES LUNG OLD: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Lung |
Old |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES LUNG YOUNG: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Lung |
Young |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES MUSCLE AGED: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Muscle |
Aged |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGE DEPENDENT CIRCADIAN CHANGES MUSCLE YOUNG: Defining age-dependent changes at the systems level, profiling the circadian transcriptome in the hypothalamus, lung, heart, kidney, skeletal muscle, and adrenal gland in 3 age group |
Mus musculus |
Muscle |
Young |
GSE201207 |
Age |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| AGING EPIDERMAL ADULT CONTROL-DIET: Adult stem cells undergo circadian reprogramming during ageing, epidermal stem cells, adult animals |
Mus musculus |
Skin |
Control-Diet |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| AGING EPIDERMAL ADULT RESTRICTED-DIET: Adult stem cells undergo circadian reprogramming during ageing, epidermal stem cells, adult animals |
Mus musculus |
Skin |
Restricted-Diet |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| AGING EPIDERMAL AGED AGED: Adult stem cells undergo circadian reprogramming during ageing, epidermal stem cells, aged animals |
Mus musculus |
Skin |
Aged |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| AGING EPIDERMAL AGED YOUNG: Adult stem cells undergo circadian reprogramming during ageing, epidermal stem cells, aged animals |
Mus musculus |
Skin |
Young |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| AGING EPIDERMAL NORMAL CONTROL-DIET: Adult stem cells undergo circadian reprogramming during ageing, epidermal stem cells, control animals |
Mus musculus |
Skin |
Control-Diet |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| AGING EPIDERMAL NORMAL HIGH-FAT-DIET: Adult stem cells undergo circadian reprogramming during ageing, epidermal stem cells, control animals |
Mus musculus |
Skin |
High-Fat-Diet |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| AGING EPIDERMAL NORMAL ND-CONTROL-DIET: Adult stem cells undergo circadian reprogramming during ageing, epidermal stem cells, control animals |
Mus musculus |
Skin |
Nd-Control-Diet |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| AGING EPIDERMAL NORMAL RESTRICTED-DIET: Adult stem cells undergo circadian reprogramming during ageing, epidermal stem cells, control animals |
Mus musculus |
Skin |
Restricted-Diet |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| AGING SATELLITE ADULT CONTROL-DIET: Adult stem cells undergo circadian reprogramming during ageing, satellite stem cells, adult animals |
Mus musculus |
Skin |
Control-Diet |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| AGING SATELLITE ADULT RESTRICTED-DIET: Adult stem cells undergo circadian reprogramming during ageing, satellite stem cells, adult animals |
Mus musculus |
Skin |
Restricted-Diet |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| AGING SATELLITE AGED CONTROL-DIET: Aged stem cells undergo circadian reprogramming during ageing, satellite stem cells, aged animals |
Mus musculus |
Skin |
Control-Diet |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| AGING SATELLITE AGED RESTRICTED-DIET: Aged stem cells undergo circadian reprogramming during ageing, satellite stem cells, aged animals |
Mus musculus |
Skin |
Restricted-Diet |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| AGING SATELLITE NORMAL CONTROL-DIET: Adult stem cells undergo circadian reprogramming during ageing, satellite stem cells, control animals |
Mus musculus |
Skin |
Control-Diet |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| AGING SATELLITE NORMAL HIGH-FAT-DIET: Adult stem cells undergo circadian reprogramming during ageing, satellite stem cells, control animals |
Mus musculus |
Skin |
High-Fat-Diet |
GSE84580 |
Diet, Control |
12, 20, 16, 0, 4, 8 |
Link |
| ARABIDOPSIS PLANT EDWARDS 2007 WT: Study the circadian expression of genes to model the Arabidopsis circadian clock |
Arabidopsis thaliana |
Plant |
Wild-Type |
GSE5612 |
Control |
26, 38, 58, 46, 54, 30, 42, 50, 34, 62, 74, 66, 70 |
Link |
| BABOON ADRENAL CORTEX MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Glands |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON ADRENAL MEDULLA MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Glands |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON AMYGDALA MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON ANTRUM MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Digestive |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON AORTA ENDOTHELIUM MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Heart |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON ARCUATE NUCLEUS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON ASCENDING COLON MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Digestive |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON AXILLARY LYMPHONODES MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON BLADDER MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Bladder |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON BONE MARROW MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Bone |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON CECUM MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Digestive |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON CEREBELLUM MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON CORNEA MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Eye |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON DESCENDING COLON MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Digestive |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON DORSOMEDIAL HYPOTHALAMUS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON DUODENUM MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Digestive |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON HABENULA MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON HEART MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Heart |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON HIPPOCAMPUS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON ILEUM MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Digestive |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON IRIS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Eye |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON KIDNEY CORTEX MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Kidney |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON KIDNEY MEDULLA MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Kidney |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON LATERAL GLOBUS PALLIDUS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON LATERAL HYPOTHALAMUS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON LIVER MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Liver |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON LUNG MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Lung |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON MAMMILARY BODIES MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON MEDIAL GLOBUS PALLIDUS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON MESENTERIC LYMPHONODES MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Bone |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON MUSCLE ABDOMINAL MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Muscle |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON MUSCLE GASTROCNEMIAN MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Muscle |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON OESOPHAGUS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Digestive |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON OLFACTORY BULB MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON OMENTAL FAT MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Adipose |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON OPTIC NERVE HEAD MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Eye |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON PANCREAS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Glands |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON PARAVENTRICULAR NUCLEI MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON PINEAL MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Glands |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON PITUITARY MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Glands |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON PONS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON PREFRONTAL CORTEX MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON PREOPTIC AREA MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON PROSTATE MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Glands |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON PUTAMEN MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON RETINA MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Eye |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON RETINAL PIGMENT EPITHELIUM MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Eye |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON SKIN MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Skin |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON SMOOTH MUSCLE MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Muscle |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON SPLEEN MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Glands |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON STOMACH FUNDUS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Digestive |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON SUBSTANTIA NIGRA MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON SUPRACHIASMATIC NUCLEI MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON SUPRAOPTIC NUCLEUS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON TESTICLES MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Reproductive |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON THALAMUS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON THYROID MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Glands |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON VENTRO MEDIAL HYPOTHALAMUS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON VISUAL CORTEX MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Brain |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON WHITE ADIPOSE MESENTERIC MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Adipose |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON WHITE ADIPOSE PERICARDIAL MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Adipose |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON WHITE ADIPOSE PERIRENAL MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Adipose |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON WHITE ADIPOSE RETROPERITONEAL MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Adipose |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| BABOON WHITE ADIPOSE SUBCUTANEOUS MURE 2018 WT: Diurnal transcriptome of 64 tissues sampled every 2 hours over 24 hours. |
Papio anubis |
Adipose |
Wild-Type |
GSE98965 |
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| C. ELEGANS 2024 NHR-23 KO: C. elegans were cultivated under temperature cycles. Then, depleted NHR-23, and sampled worms under constant(CC) condition every 2 h. |
Caenorhabditis elegans |
Whole Body |
KO |
GSE233891 |
Knock-Out |
11, 13, 15, 21, 17, 23, 19, 1, 3, 5, 7, 9 |
Link |
| C.ELEGANS DEVELOPMENT ON FOOD WT: Synchronized L1 stage larvae were placed on food at 25C, and samples collected hourly over a 16 hr period that covered development from L3 to the young adult stage. |
Caenorhabditis elegans |
Whole Body |
Wild-Type |
GSE52910 |
Control |
11, 10, 13, 12, 15, 14, 16, 1, 3, 2, 5, 4, 7, 6, 9, 8 |
Link |
| CDKL5 IMPACT IN HIPPOCAMPUS KO: |
Mus musculus |
Brain |
KO |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| CDKL5 IMPACT IN HIPPOCAMPUS WT: |
Mus musculus |
Brain |
Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| CDKL5 IMPACT IN SCN KO: |
Mus musculus |
Brain |
KO |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| CDKL5 IMPACT IN SCN WT: |
Mus musculus |
Brain |
Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| DROSOPHILA KADENER 2015 CBTOE: Flies were entrained in LD (light: dark) condition for 3-4 days and harvested at six time points |
Drosophila melanogaster |
Liver |
Cbtoe |
|
Light-Dark |
11, 15, 23, 19, 3, 7 |
Link |
| DROSOPHILA KADENER 2015 CBTOE-CONTROL: Flies were entrained in LD (light: dark) condition for 3-4 days and harvested at six time points |
Drosophila melanogaster |
Liver |
Cbtoe-Control |
|
Light-Dark |
11, 15, 23, 19, 3, 7 |
Link |
| DROSOPHILA KADENER 2015 CBTRNAI: Flies were entrained in LD (light: dark) condition for 3-4 days and harvested at six time points |
Drosophila melanogaster |
Liver |
Cbtrnai |
|
Light-Dark |
11, 15, 23, 19, 3, 7 |
Link |
| DROSOPHILA KADENER 2015 CBTRNAI-CONTROL: Flies were entrained in LD (light: dark) condition for 3-4 days and harvested at six time points |
Drosophila melanogaster |
Liver |
Cbtrnai-Control |
|
Light-Dark |
11, 15, 23, 19, 3, 7 |
Link |
| DROSOPHILA TEMPERATURE KADENER 2019 18C: RNA seq from fly heads at 3 temperatures (18, 25, 29C) and circadian timepoints (zt3, zt7, zt11, zt15, zt18, zt23) |
Drosophila melanogaster |
Brain |
18c |
|
Temperature |
11, 15, 23, 19, 3, 7 |
Link |
| DROSOPHILA TEMPERATURE KADENER 2019 25C: RNA seq from fly heads at 3 temperatures (18, 25, 29C) and circadian timepoints (zt3, zt7, zt11, zt15, zt18, zt23) |
Drosophila melanogaster |
Brain |
25c |
|
Temperature |
11, 15, 23, 19, 3, 7 |
Link |
| DROSOPHILA TEMPERATURE KADENER 2019 29C: RNA seq from fly heads at 3 temperatures (18, 25, 29C) and circadian timepoints (zt3, zt7, zt11, zt15, zt18, zt23) |
Drosophila melanogaster |
Brain |
29c |
|
Temperature |
11, 15, 23, 19, 3, 7 |
Link |
| DROSOPHILA TIM PROMOTER/ENHANCER TIM IN24: Effects of regulatory element deletions on circadian gene expression |
Drosophila melanogaster |
Brain |
In24 |
GSE259245 |
Control |
10, 14, 22, 18, 2, 6 |
Link |
| DROSOPHILA TIM PROMOTER/ENHANCER TIM UP10: Effects of regulatory element deletions on circadian gene expression |
Drosophila melanogaster |
Brain |
Up10 |
GSE259245 |
Control |
10, 14, 22, 18, 2, 6 |
Link |
| DROSOPHILA TIM PROMOTER/ENHANCER TIM UP122: Effects of regulatory element deletions on circadian gene expression |
Drosophila melanogaster |
Brain |
Up122 |
GSE259245 |
Control |
10, 14, 22, 18, 2, 6 |
Link |
| DROSOPHILA TIM PROMOTER/ENHANCER TIM UP126: Effects of regulatory element deletions on circadian gene expression |
Drosophila melanogaster |
Brain |
Up126 |
GSE259245 |
Control |
10, 14, 22, 18, 2, 6 |
Link |
| DROSOPHILA TIM PROMOTER/ENHANCER WT: Effects of regulatory element deletions on circadian gene expression |
Drosophila melanogaster |
Brain |
Wild-Type |
GSE259245 |
Control |
10, 14, 22, 18, 2, 6 |
Link |
| EMBRYONIC HEART E10: Involvement of posttranscriptional regulation of Clock in the emergence of circadian clock oscillation during mouse development, embryonic or young mouse heart |
Mus musculus |
Heart |
E10 |
|
Control |
24, 12, 20, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| EMBRYONIC HEART E17: Involvement of posttranscriptional regulation of Clock in the emergence of circadian clock oscillation during mouse development, embryonic or young mouse heart |
Mus musculus |
Heart |
E17 |
|
Control |
24, 12, 20, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| EMBRYONIC HEART YOUNG: Involvement of posttranscriptional regulation of Clock in the emergence of circadian clock oscillation during mouse development, embryonic or young mouse heart |
Mus musculus |
Heart |
Young |
|
Control |
24, 12, 20, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL ARCUATE NUCLEUS HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL ARCUATE NUCLEUS LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL BRAINSTEM HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL BRAINSTEM LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL BROWN ADIPOSE HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Arcuate nucleus |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL BROWN ADIPOSE LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Arcuate nucleus |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL CEREBELLUM HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL CEREBELLUM LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL CORTEX HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL CORTEX LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL DORSOMEDIAL HYPOTHALAMUS HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL DORSOMEDIAL HYPOTHALAMUS LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL HABENULA HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL HABENULA LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL HIPPOCAMPUS HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL HIPPOCAMPUS LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL LATERAL HYPOTHALAMUS CAUDAL HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL LATERAL HYPOTHALAMUS CAUDAL LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL LATERAL HYPOTHALAMUS ROSTRAL HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL LATERAL HYPOTHALAMUS ROSTRAL LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL LIVER HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Liver |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL LIVER LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Liver |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL OLFACTORY BULB HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL OLFACTORY BULB LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL PARAVENTRICULAR NUCLEI HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL PARAVENTRICULAR NUCLEI LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL PARAVENTRICULAR NUCLEUS THALAMUS HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL PARAVENTRICULAR NUCLEUS THALAMUS LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL PERIVENTRICULAR ZONE HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL PERIVENTRICULAR ZONE LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL PREFRONTAL CORTEX HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL PREFRONTAL CORTEX LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL PREOPTIC AREA HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL PREOPTIC AREA LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL QUADRICEPS HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Muscle |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL QUADRICEPS LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Muscle |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL SUPRACHIASMATIC NUCLEUS HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL SUPRACHIASMATIC NUCLEUS LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL TESTIS HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Testis |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL TESTIS LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Testis |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL VENTROMEDIAL HYPOTHALAMUS HIGH-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
High-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| ENERGY BALANCE DIURNAL NOCTURNAL VENTROMEDIAL HYPOTHALAMUS LOW-WORKLOAD: Regulating wheel-running activity with food rewards, Switching between nocturnality and diurnality, and revealing distinct rhythmic gene expression in various tissues and brain regions. |
Mus musculus |
Brain |
Low-Workload |
GSE228967 |
Exercise |
13, 21, 17, 1, 5, 9 |
Link |
| GUT KO TOMOKI 2021 KO: |
Mus musculus |
Digestive |
KO |
|
Knock-Out |
12, 20, 16, 0, 4, 8 |
Link |
| GUT KO TOMOKI 2021 WT: |
Mus musculus |
Digestive |
Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| GUT MICROBIOTA AFFECT IN DUODENUM MALE GERM-FREE: Rolee of gut microbiota in daily rhythms of gene expression and physiology |
Mus musculus |
Digestive |
Germ-Free |
GSE114399 |
Microbiome |
10, 14, 22, 18, 2, 6 |
Link |
| GUT MICROBIOTA AFFECT IN DUODENUM MALE WT: Rolee of gut microbiota in daily rhythms of gene expression and physiology |
Mus musculus |
Digestive |
Wild-Type |
GSE114399 |
Control |
10, 14, 22, 18, 2, 6 |
Link |
| GUT MICROBIOTA AFFECT IN ILEUM MALE GERM-FREE: Role of gut microbiota in daily rhythms of gene expression and physiology |
Mus musculus |
Digestive |
Germ-Free |
GSE114399 |
Microbiome |
10, 14, 22, 18, 2, 6 |
Link |
| GUT MICROBIOTA AFFECT IN ILEUM MALE WT: Role of gut microbiota in daily rhythms of gene expression and physiology |
Mus musculus |
Digestive |
Wild-Type |
GSE114399 |
Control |
10, 14, 22, 18, 2, 6 |
Link |
| GUT MICROBIOTA AFFECT IN LIVER FEMALE GERM-FREE: Role of gut microbiota in daily rhythms of gene expression and physiology |
Mus musculus |
Liver |
Germ-Free |
GSE114400 |
Microbiome |
10, 14, 22, 18, 2, 6 |
Link |
| GUT MICROBIOTA AFFECT IN LIVER FEMALE WT: Role of gut microbiota in daily rhythms of gene expression and physiology |
Mus musculus |
Liver |
Wild-Type |
GSE114400 |
Control |
10, 14, 22, 18, 2, 6 |
Link |
| GUT MICROBIOTA AFFECT IN LIVER MALE GERM-FREE: Role of gut microbiota in daily rhythms of gene expression and physiology |
Mus musculus |
Liver |
Germ-Free |
GSE114400 |
Microbiome |
10, 14, 22, 18, 2, 6 |
Link |
| GUT MICROBIOTA AFFECT IN LIVER MALE WT: Role of gut microbiota in daily rhythms of gene expression and physiology |
Mus musculus |
Liver |
Wild-Type |
GSE114400 |
Control |
10, 14, 22, 18, 2, 6 |
Link |
| GUT MICROBIOTA AFFECT IN MALE CRY KO: Role of gut microbiota in daily rhythms of gene expression and physiology |
Mus musculus |
Liver |
KO |
GSE114402 |
Knock-Out |
10, 14, 22, 18, 2, 6 |
Link |
| GUT MICROBIOTA AFFECT IN WHITE ADIPOSE MALE GERM-FREE: Role of gut microbiota in daily rhythms of gene expression and physiology |
Mus musculus |
Adipose |
Germ-Free |
GSE114401 |
Microbiome |
10, 14, 22, 18, 2, 6 |
Link |
| GUT MICROBIOTA AFFECT IN WHITE ADIPOSE MALE WT: Role of gut microbiota in daily rhythms of gene expression and physiology |
Mus musculus |
Adipose |
Wild-Type |
GSE114401 |
Control |
10, 14, 22, 18, 2, 6 |
Link |
| GUT RE TOMOKI 2021 KO: |
Mus musculus |
Digestive |
KO |
|
Knock-Out |
12, 20, 16, 0, 4, 8 |
Link |
| GUT RE TOMOKI 2021 RE: |
Mus musculus |
Digestive |
Re |
|
Knock-Out |
12, 20, 16, 0, 4, 8 |
Link |
| GUT RE TOMOKI 2021 WT: |
Mus musculus |
Digestive |
Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| HUMAN BREAST GUTIERREZ 2016 CANCER: Gene expression analysis of cancerous breast cell lines determine the degree to which the circadian clock is damaged. |
Homo sapiens |
Cells |
Cancer |
GSE76370 |
Cancer |
24, 12, 20, 16, 28, 0, 4, 8 |
Link |
| HUMAN FIBROBLAST LIU 2017 MYOGENIC-REPROGRAMMING: Human Fibroblast Reprogrammed to Myogenic Lineage via MyoD1 |
Homo sapiens |
Cells |
Myogenic-Reprogramming |
GSE54652 |
Control |
24, 16, 32, 40, 0, 8 |
Link |
| HUMAN PANCREATIC DUCTAL ADENOCARCINOMA ASPC1: Explored the presence of the circadian transcriptome in PDA using patient-derived organoids (PDOs) and validated these findings by comparing PDA data from TCGA with non-cancerous healthy pancreas data from GTeX |
Homo sapiens |
Cells |
Aspc1 |
GSE262627 |
Control |
24, 12, 20, 16, 0, 4, 8 |
Link |
| HUMAN PANCREATIC DUCTAL ADENOCARCINOMA CAPAN1: Explored the presence of the circadian transcriptome in PDA using patient-derived organoids (PDOs) and validated these findings by comparing PDA data from TCGA with non-cancerous healthy pancreas data from GTeX |
Homo sapiens |
Cells |
Capan1 |
GSE262627 |
Control |
24, 12, 20, 16, 0, 4, 8 |
Link |
| HUMAN PANCREATIC DUCTAL ADENOCARCINOMA MIAPACA2: Explored the presence of the circadian transcriptome in PDA using patient-derived organoids (PDOs) and validated these findings by comparing PDA data from TCGA with non-cancerous healthy pancreas data from GTeX |
Homo sapiens |
Cells |
Miapaca2 |
GSE262627 |
Control |
24, 12, 20, 16, 0, 4, 8 |
Link |
| HUMAN PANCREATIC DUCTAL ADENOCARCINOMA ORGANOID: Explored the presence of the circadian transcriptome in PDA using patient-derived organoids (PDOs) and validated these findings by comparing PDA data from TCGA with non-cancerous healthy pancreas data from GTeX |
Homo sapiens |
Organoid |
Organoid |
GSE262627 |
Control |
24, 12, 20, 16, 0, 4, 8 |
Link |
| HUMAN PANCREATIC DUCTAL ADENOCARCINOMA PANC1: Explored the presence of the circadian transcriptome in PDA using patient-derived organoids (PDOs) and validated these findings by comparing PDA data from TCGA with non-cancerous healthy pancreas data from GTeX |
Homo sapiens |
Cells |
Panc1 |
GSE262627 |
Control |
24, 12, 20, 16, 0, 4, 8 |
Link |
| HUMAN SERUM NA 2017 TBI-PATIENT-1: Patients with inconsistent chrono-types diagnosed with TBI |
Homo sapiens |
Blood |
Traumatic Brain Injury |
|
Disease |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| HUMAN SERUM NA 2017 TBI-PATIENT-10: Patients with inconsistent chrono-types diagnosed with TBI |
Homo sapiens |
Blood |
Traumatic Brain Injury |
|
Disease |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| HUMAN SERUM NA 2017 TBI-PATIENT-11: Patients with inconsistent chrono-types diagnosed with TBI |
Homo sapiens |
Blood |
Traumatic Brain Injury |
|
Disease |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| HUMAN SERUM NA 2017 TBI-PATIENT-12: Patients with inconsistent chrono-types diagnosed with TBI |
Homo sapiens |
Blood |
Traumatic Brain Injury |
|
Disease |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| HUMAN SERUM NA 2017 TBI-PATIENT-2: Patients with inconsistent chrono-types diagnosed with TBI |
Homo sapiens |
Blood |
Traumatic Brain Injury |
|
Disease |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| HUMAN SERUM NA 2017 TBI-PATIENT-3: Patients with inconsistent chrono-types diagnosed with TBI |
Homo sapiens |
Blood |
Traumatic Brain Injury |
|
Disease |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| HUMAN SERUM NA 2017 TBI-PATIENT-4: Patients with inconsistent chrono-types diagnosed with TBI |
Homo sapiens |
Blood |
Traumatic Brain Injury |
|
Disease |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| HUMAN SERUM NA 2017 TBI-PATIENT-5: Patients with inconsistent chrono-types diagnosed with TBI |
Homo sapiens |
Blood |
Traumatic Brain Injury |
|
Disease |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| HUMAN SERUM NA 2017 TBI-PATIENT-6: Patients with inconsistent chrono-types diagnosed with TBI |
Homo sapiens |
Blood |
Traumatic Brain Injury |
|
Disease |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| HUMAN SERUM NA 2017 TBI-PATIENT-7: Patients with inconsistent chrono-types diagnosed with TBI |
Homo sapiens |
Blood |
Traumatic Brain Injury |
|
Disease |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| HUMAN SERUM NA 2017 TBI-PATIENT-8: Patients with inconsistent chrono-types diagnosed with TBI |
Homo sapiens |
Blood |
Traumatic Brain Injury |
|
Disease |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| HUMAN SERUM NA 2017 TBI-PATIENT-9: Patients with inconsistent chrono-types diagnosed with TBI |
Homo sapiens |
Blood |
Traumatic Brain Injury |
|
Disease |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| HUMAN U2 OS HUGHES 2009 OSTEOSARCOMA: Comparison of oscillating transcription from mouse liver, NIH3T3, and U2OS cells showing 12-hour oscillatory transcripts. |
Homo sapiens |
Cells |
Osteosarcoma |
GSE11923 |
Control |
42, 48, 43, 24, 25, 26, 27, 20, 21, 22, 23, 46, 47, 44, 45, 28, 29, 40, 41, 1, 3, 2, 5, 4, 7, 6, 9, 8, 39, 38, 11, 10, 13, 12, 15, 14, 17, 16, 19, 18, 31, 30, 37, 36, 35, 34, 33, 32 |
Link |
| HYPOXIA AND OBSTRUCTIVE SLEEP APNEA CER HYPOXIC: Effect of intermittent hypoxia on 24-hour expression in lung, heart, liver, kidney, muscle, and cerebellum. |
Mus musculus |
Brain |
Hypoxic |
GSE214530 |
Oxygen-Level |
12, 15, 21, 18, 0, 3, 6, 9 |
Link |
| HYPOXIA AND OBSTRUCTIVE SLEEP APNEA CER NORMOXIC: Effect of intermittent hypoxia on 24-hour expression in lung, heart, liver, kidney, muscle, and cerebellum. |
Mus musculus |
Brain |
Normoxic |
GSE214530 |
Oxygen-Level |
12, 15, 21, 18, 0, 3, 6, 9 |
Link |
| HYPOXIA AND OBSTRUCTIVE SLEEP APNEA HEART HYPOXIC: Effect of intermittent hypoxia on 24-hour expression in lung, heart, liver, kidney, muscle, and cerebellum. |
Mus musculus |
Heart |
Hypoxic |
GSE214530 |
Oxygen-Level |
12, 15, 21, 18, 0, 3, 6, 9 |
Link |
| HYPOXIA AND OBSTRUCTIVE SLEEP APNEA HEART NORMOXIC: Effect of intermittent hypoxia on 24-hour expression in lung, heart, liver, kidney, muscle, and cerebellum. |
Mus musculus |
Heart |
Normoxic |
GSE214530 |
Oxygen-Level |
12, 15, 21, 18, 0, 3, 6, 9 |
Link |
| HYPOXIA AND OBSTRUCTIVE SLEEP APNEA KIDNEY HYPOXIC: Effect of intermittent hypoxia on 24-hour expression in lung, heart, liver, kidney, muscle, and cerebellum. |
Mus musculus |
Kidney |
Hypoxic |
GSE214530 |
Oxygen-Level |
12, 15, 21, 18, 0, 3, 6, 9 |
Link |
| HYPOXIA AND OBSTRUCTIVE SLEEP APNEA KIDNEY NORMOXIC: Effect of intermittent hypoxia on 24-hour expression in lung, heart, liver, kidney, muscle, and cerebellum. |
Mus musculus |
Kidney |
Normoxic |
GSE214530 |
Oxygen-Level |
12, 15, 21, 18, 0, 3, 6, 9 |
Link |
| HYPOXIA AND OBSTRUCTIVE SLEEP APNEA LIVER HYPOXIC: Effect of intermittent hypoxia on 24-hour expression in lung, heart, liver, kidney, muscle, and cerebellum. |
Mus musculus |
Liver |
Hypoxic |
GSE214530 |
Oxygen-Level |
12, 15, 21, 18, 0, 3, 6, 9 |
Link |
| HYPOXIA AND OBSTRUCTIVE SLEEP APNEA LIVER NORMOXIC: Effect of intermittent hypoxia on 24-hour expression in lung, heart, liver, kidney, muscle, and cerebellum. |
Mus musculus |
Liver |
Normoxic |
GSE214530 |
Oxygen-Level |
12, 15, 21, 18, 0, 3, 6, 9 |
Link |
| HYPOXIA AND OBSTRUCTIVE SLEEP APNEA LUNG HYPOXIC: Effect of intermittent hypoxia on 24-hour expression in lung, heart, liver, kidney, muscle, and cerebellum. |
Mus musculus |
Lung |
Hypoxic |
GSE214530 |
Oxygen-Level |
12, 15, 21, 18, 0, 3, 6, 9 |
Link |
| HYPOXIA AND OBSTRUCTIVE SLEEP APNEA LUNG NORMOXIC: Effect of intermittent hypoxia on 24-hour expression in lung, heart, liver, kidney, muscle, and cerebellum. |
Mus musculus |
Lung |
Normoxic |
GSE214530 |
Oxygen-Level |
12, 15, 21, 18, 0, 3, 6, 9 |
Link |
| HYPOXIA AND OBSTRUCTIVE SLEEP APNEA MUSCLE HYPOXIC: Effect of intermittent hypoxia on 24-hour expression in lung, heart, liver, kidney, muscle, and cerebellum. |
Mus musculus |
Muscle |
Hypoxic |
GSE214530 |
Oxygen-Level |
12, 15, 21, 18, 0, 3, 6, 9 |
Link |
| HYPOXIA AND OBSTRUCTIVE SLEEP APNEA MUSCLE NORMOXIC: Effect of intermittent hypoxia on 24-hour expression in lung, heart, liver, kidney, muscle, and cerebellum. |
Mus musculus |
Muscle |
Normoxic |
GSE214530 |
Oxygen-Level |
12, 15, 21, 18, 0, 3, 6, 9 |
Link |
| INSULIN AND LEPTIN OSCILLATIONS AD-LIB: Effect of timed-feeding (Ad-Lib or twice-a-night) on causing biphasic oscillations of circulating insulin and leptin. |
Mus musculus |
iWAT |
Ad-Lib |
GSE264173 |
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| INSULIN AND LEPTIN OSCILLATIONS TWICE-A-NIGHT: Effect of timed-feeding (Ad-Lib or twice-a-night) on causing biphasic oscillations of circulating insulin and leptin. |
Mus musculus |
iWAT |
Twice-A-Night |
GSE264173 |
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| KETONE BODIES AND KETOGENESIS FEMALE AD-LIBITUM: Sex difference in liver transcriptome of mice on calorie restriction (CR) diet versus ad libitum (AL) fed mice |
Mus musculus |
Liver |
Ad-Libitum |
GSE216416 |
Diet |
10, 14, 22, 18, 2, 6 |
Link |
| KETONE BODIES AND KETOGENESIS FEMALE CALORIE-RESTRICTION: Sex difference in liver transcriptome of mice on calorie restriction (CR) diet versus ad libitum (AL) fed mice |
Mus musculus |
Liver |
Calorie-Restriction |
GSE216416 |
Diet |
10, 14, 22, 18, 2, 6 |
Link |
| KETONE BODIES AND KETOGENESIS MALE AD-LIBITUM: Liver transcriptome of mice on calorie restriction (CR) diet versus ad libitum (AL) fed mice |
Mus musculus |
Liver |
Ad-Libitum |
GSE211975 |
Diet |
10, 14, 22, 18, 2, 6 |
Link |
| KETONE BODIES AND KETOGENESIS MALE CALORIE-RESTRICTION: Liver transcriptome of mice on calorie restriction (CR) diet versus ad libitum (AL) fed mice |
Mus musculus |
Liver |
Calorie-Restriction |
GSE211975 |
Diet |
10, 14, 22, 18, 2, 6 |
Link |
| MATERNAL DIET AFFECT ON 16 WEEKS OFFSPRING HIGH-FAT: Maternal diet's impact on circadian rhythms of 4-weeks and 16-weeks offspring |
Mus musculus |
Liver |
High-Fat |
GSE240147 |
Diet |
13, 21, 17, 1, 5, 9 |
Link |
| MATERNAL DIET AFFECT ON 16 WEEKS OFFSPRING NORMAL-CHOW: Maternal diet's impact on circadian rhythms of 4-weeks and 16-weeks offspring |
Mus musculus |
Liver |
Normal-Chow |
GSE240147 |
Control |
13, 21, 17, 1, 5, 9 |
Link |
| MATERNAL DIET AFFECT ON 4 WEEKS OFFSPRING HIGH-FAT: Maternal diet's impact on circadian rhythms of 4-weeks and 16-weeks offspring |
Mus musculus |
Liver |
High-Fat |
GSE240147 |
Diet |
13, 21, 17, 1, 5, 9 |
Link |
| MATERNAL DIET AFFECT ON 4 WEEKS OFFSPRING NORMAL-CHOW: Maternal diet's impact on circadian rhythms of 4-weeks and 16-weeks offspring |
Mus musculus |
Liver |
Normal-Chow |
GSE240147 |
Control |
13, 21, 17, 1, 5, 9 |
Link |
| MONKEY ADRENAL GLAND LEMOS 2006 WT: Genome-wide expression profiling to determine whether the adrenal gland of rhesus monkeys shows temporal gene expression across a 24-h period. |
Rhesus macaques |
Glands |
Wild-Type |
GSE2703 |
Control |
11, 15, 23, 19, 3, 7 |
Link |
| MOSQUITO EMBRYO GOLTSEV 2009 DEVELOPMENT: Detailed temporal microarray assays of mosquito gene expression profiles revealed that the cuticular genes display biphasic expression during A. gambiae embryogenesi |
Anopheles gambiae |
Embryo |
Development |
GSE15001 |
Control |
10, 13, 22, 16, 19, 37, 31, 28, 43, 40, 34, 46, 2, 4, 7, 6, 8, 25 |
Link |
| MOSQUITO HEAD PTITSYN 2011 WT: Document circadian rhythms in multiple molecular pathways essential for growth, development, immune response, detoxification/pesticide resistance. |
Aedes aegypti |
Head |
Wild-Type |
|
Control |
76, 88, 72, 80, 92, 84 |
Link |
| MOSQUITO HEAD RUND 2011 DARK-DARK: DNA microarray analysis of An. gambiae under light/dark cycle (LD) and constant dark (DD) conditions. |
Anopheles gambiae |
Head |
Dark-Dark |
|
Control |
24, 12, 20, 48, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| MOSQUITO LARVA KOUTSOS 2007 DEVELOPMENT: Genome-wide survey of mosquito gene expression profiles clustered temporally into developmental programs and spatially into adult tissue-specific patterns. |
Anopheles gambiae |
Larva |
Development |
|
Control |
144, 192, 240, 48, 96 |
Link |
| MOSQUITO MID GUT MARINOTTI 2006 BLOOD-FED: Examining sex-differential changes in gene expression after blood meal. |
Anopheles gambiae |
Digestive |
Blood-Fed |
|
Control |
24, 3, 72, 48, 96 |
Link |
| MOSQUITO THORAX CHOI 2014 LIVERPOOL-INFECTED: Dual RNA-seq time course analysis of Brugia Malayi parasite and host mosquito. |
Aedes aegypti |
Thoracic |
Infected |
|
Control |
24, 72, 48, 96 |
Link |
| MOSQUITO THORAX CHOI 2014 RED-INFECTED: Dual RNA-seq time course analysis of Brugia Malayi parasite and host mosquito. |
Aedes aegypti |
Thoracic |
Infected |
|
Control |
24, 72, 48, 96 |
Link |
| MOSQUITOE CIRCADIAN DISRUPTION BY AECYC KO: Impact of disrupting the circadian clock through a Cycle gene knockout (KO) on the transcriptome of Aedes aegypti mosquitoes. |
Aedes aegypti |
Whole Body |
KO |
GSE241953 |
Knock-Out |
19, 11, 15, 7 |
Link |
| MOSQUITOE CIRCADIAN DISRUPTION BY AECYC WT: Impact of disrupting the circadian clock through a Cycle gene knockout (KO) on the transcriptome of Aedes aegypti mosquitoes. |
Aedes aegypti |
Whole Body |
Wild-Type |
GSE241953 |
Control |
19, 11, 15, 7 |
Link |
| MOUSE 3T3 HUGHES 2009 WT: Comparison of oscillating transcription from mouse liver, NIH3T3, and U2OS cells showing 12-hour oscillatory transcripts. |
Mus musculus |
Cells |
Wild-Type |
GSE11923 |
Control |
42, 48, 43, 24, 25, 26, 27, 20, 21, 22, 23, 46, 47, 44, 45, 28, 29, 40, 41, 1, 3, 2, 5, 4, 7, 6, 9, 8, 39, 38, 11, 10, 13, 12, 15, 14, 17, 16, 19, 18, 31, 30, 37, 36, 35, 34, 33, 32 |
Link |
| MOUSE ADRENAL GLAND NA 2018 WT: Mouse Adrenal Gland Transcriptome |
Mus musculus |
Glands |
Wild-Type |
|
Control |
38, 58, 46, 54, 42, 50, 62, 74, 66, 70, 82, 78 |
Link |
| MOUSE ADRENAL GLAND ZHANG 2014 WT: Wild-type C57/BL6 mouse tissue microarray in the Circadian Atlas project. |
Mus musculus |
Glands |
Wild-Type |
GSE54652 |
Control |
56, 42, 50, 60, 62, 64, 32, 24, 26, 20, 48, 46, 44, 28, 40, 52, 58, 38, 22, 54, 30, 36, 34, 18 |
Link |
| MOUSE AORTA RUDIC 2005 WT: Bioinformatic Analysis of Circadian Gene Oscillation in Mouse Aorta |
Mus musculus |
Heart |
Wild-Type |
|
Control |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| MOUSE AORTA ZHANG 2014 WT: Wild-type C57/BL6 mouse tissue microarray in the Circadian Atlas project. |
Mus musculus |
Heart |
Wild-Type |
GSE54652 |
Control |
56, 42, 50, 60, 62, 64, 32, 24, 26, 20, 48, 46, 44, 28, 40, 52, 58, 38, 22, 54, 30, 36, 34, 18 |
Link |
| MOUSE BAT RESTRICTED FEEDING AD-LIB: Circadian gene expression in brown adipose tissue (BAT) and liver under the following five conditions: ad libitum (AL); temporally restricted during the dark phase (TR-night) or light phase (TR-day); and calorically restricted during the dark phase (CR-night) or light phase (CR-day) |
Mus musculus |
Adipose |
Ad-Lib |
GSE266543 |
Diet |
24, 12, 20, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| MOUSE BAT RESTRICTED FEEDING CR-DAY: Circadian gene expression in brown adipose tissue (BAT) and liver under the following five conditions: ad libitum (AL); temporally restricted during the dark phase (TR-night) or light phase (TR-day); and calorically restricted during the dark phase (CR-night) or light phase (CR-day) |
Mus musculus |
Adipose |
Cr-Day |
GSE266543 |
Diet |
24, 12, 20, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| MOUSE BMAL1 12H PHASED CONTROL-AM: 12 hours apart MSF synchronization and experimenting the knock-out of BMAL1. |
Mus musculus |
Skin |
Control-Am |
GSE134333 |
Control, Light-Dark |
24, 39, 12, 15, 21, 48, 33, 18, 30, 42, 36, 0, 3, 27, 6, 9, 45 |
Link |
| MOUSE BMAL1 12H PHASED CONTROL-PM: 12 hours apart MSF synchronization and experimenting the knock-out of BMAL1. |
Mus musculus |
Skin |
Control-Pm |
GSE134333 |
Control, Light-Dark |
24, 39, 12, 15, 21, 48, 33, 18, 30, 42, 36, 0, 3, 27, 6, 9, 45 |
Link |
| MOUSE BMAL1 12H PHASED KO-AM: 12 hours apart MSF synchronization and experimenting the knock-out of BMAL1. |
Mus musculus |
Skin |
KO-Am |
GSE134333 |
Knock-Out, Light-Dark |
24, 39, 12, 15, 21, 48, 33, 18, 30, 42, 36, 0, 3, 27, 6, 9, 45 |
Link |
| MOUSE BMAL1 12H PHASED KO-PM: 12 hours apart MSF synchronization and experimenting the knock-out of BMAL1. |
Mus musculus |
Skin |
KO-Pm |
GSE134333 |
Knock-Out, Light-Dark |
24, 39, 12, 15, 21, 48, 33, 18, 30, 42, 36, 0, 3, 27, 6, 9, 45 |
Link |
| MOUSE BMAL1 EFFECTS ON AGING AND SURVIVAL KO: Bmal1 elimination and certain aging-related phenotypes without affecting lifespan or metabolism, suggesting a nuanced role of Bmal1 beyond its traditional circadian functions. |
Mus musculus |
Liver |
KO |
GSE70499 |
Knock-Out |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE BMAL1 EFFECTS ON AGING AND SURVIVAL WT: Bmal1 elimination and certain aging-related phenotypes without affecting lifespan or metabolism, suggesting a nuanced role of Bmal1 beyond its traditional circadian functions. |
Mus musculus |
Liver |
Wild-Type |
GSE70499 |
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE BMAL1 TEMPERATURE COMPENSATION CONTROL-27C: MSFs kept in different temperatures and experimenting the knock-out of BMAL1. |
Mus musculus |
Skin |
Control-27c |
GSE134333 |
Control, Temperature |
42, 24, 26, 20, 22, 46, 44, 28, 40, 0, 2, 4, 6, 8, 38, 10, 12, 14, 16, 18, 30, 36, 34, 32 |
Link |
| MOUSE BMAL1 TEMPERATURE COMPENSATION CONTROL-32C: MSFs kept in different temperatures and experimenting the knock-out of BMAL1. |
Mus musculus |
Skin |
Control-32c |
GSE134333 |
Control, Temperature |
42, 24, 26, 20, 22, 46, 44, 28, 40, 0, 2, 4, 6, 8, 38, 10, 12, 14, 16, 18, 30, 36, 34, 32 |
Link |
| MOUSE BMAL1 TEMPERATURE COMPENSATION CONTROL-37C: MSFs kept in different temperatures and experimenting the knock-out of BMAL1. |
Mus musculus |
Skin |
Control-37c |
GSE134333 |
Control, Temperature |
42, 24, 26, 20, 22, 46, 44, 28, 40, 0, 2, 4, 6, 8, 38, 10, 12, 14, 16, 18, 30, 36, 34, 32 |
Link |
| MOUSE BMAL1 TEMPERATURE COMPENSATION KO-27C: MSFs kept in different temperatures and experimenting the knock-out of BMAL1. |
Mus musculus |
Skin |
KO-27c |
GSE134333 |
Knock-Out, Temperature |
42, 24, 26, 20, 22, 46, 44, 28, 40, 0, 2, 4, 6, 8, 38, 10, 12, 14, 16, 18, 30, 36, 34, 32 |
Link |
| MOUSE BMAL1 TEMPERATURE COMPENSATION KO-32C: MSFs kept in different temperatures and experimenting the knock-out of BMAL1. |
Mus musculus |
Skin |
KO-32c |
GSE134333 |
Knock-Out, Temperature |
42, 24, 26, 20, 22, 46, 44, 28, 40, 0, 2, 4, 6, 8, 38, 10, 12, 14, 16, 18, 30, 36, 34, 32 |
Link |
| MOUSE BMAL1 TEMPERATURE COMPENSATION KO-37C: MSFs kept in different temperatures and experimenting the knock-out of BMAL1. |
Mus musculus |
Skin |
KO-37c |
GSE134333 |
Knock-Out, Temperature |
42, 24, 26, 20, 22, 46, 44, 28, 40, 0, 2, 4, 6, 8, 38, 10, 12, 14, 16, 18, 30, 36, 34, 32 |
Link |
| MOUSE BRAIN STEM ZHANG 2014 WT: Wild-type C57/BL6 mouse tissue microarray in the Circadian Atlas project. |
Mus musculus |
Brain |
Wild-Type |
GSE54652 |
Control |
56, 42, 50, 60, 62, 64, 32, 24, 26, 20, 48, 46, 44, 28, 40, 52, 58, 38, 22, 54, 30, 36, 34, 18 |
Link |
| MOUSE BREAST YANG 2017 WT: Cellular mechano-environment regulates the mammary circadian clock. |
Mus musculus |
Breast |
Wild-Type |
|
Control |
11, 39, 27, 15, 23, 19, 47, 31, 43, 35, 3, 7 |
Link |
| MOUSE BROWN FAT ANTERIOR DORSUM ZHANG 2014 WT: Wild-type C57/BL6 mouse tissue microarray in the Circadian Atlas project. |
Mus musculus |
Adipose |
Wild-Type |
GSE54652 |
Control |
56, 42, 50, 60, 62, 64, 32, 24, 26, 20, 48, 46, 44, 28, 40, 52, 58, 38, 22, 54, 30, 36, 34, 18 |
Link |
| MOUSE CEREBELLUM ZHANG 2014 WT: Wild-type C57/BL6 mouse tissue microarray in the Circadian Atlas project. |
Mus musculus |
Brain |
Wild-Type |
GSE54652 |
Control |
56, 42, 50, 60, 62, 64, 32, 24, 26, 20, 48, 46, 44, 28, 40, 52, 58, 38, 22, 54, 30, 36, 34, 18 |
Link |
| MOUSE CHOROID PLEXUS AND SCN KO: Circadian regulation of cellular processes in mouse choroid plexus (ChP) and their dependence on signals from the clock in the suprachiasmatic nuclei (SCN). |
Mus musculus |
Brain |
KO |
GSE243858 |
Control |
24, 12, 20, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| MOUSE CHOROID PLEXUS AND SCN WT: Circadian regulation of cellular processes in mouse choroid plexus (ChP) and their dependence on signals from the clock in the suprachiasmatic nuclei (SCN). |
Mus musculus |
Brain |
Wild-Type |
GSE243858 |
Control |
24, 12, 20, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| MOUSE CORTICAL COLLECTING DUCT ZUBER 2009 WT: Circadian rhythms in the distal nephron segments, i.e., distal convoluted tubule (DCT) and connecting tubule (CNT) and the cortical collecting duct (CCD) |
Mus musculus |
Kidney |
Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE DIET MOISAN 2021 HF: Mouse treated with different diet conditions |
Mus musculus |
Hippocampus |
Hf |
|
Diet |
0, 12, 18, 6 |
Link |
| MOUSE DIET MOISAN 2021 HFR: Mouse treated with different diet conditions |
Mus musculus |
Hippocampus |
Hfr |
|
Diet |
0, 12, 18, 6 |
Link |
| MOUSE DIET MOISAN 2021 NC: Mouse treated with different diet conditions |
Mus musculus |
Hippocampus |
Nc |
|
Diet |
0, 12, 18, 6 |
Link |
| MOUSE DIET MOISAN 2021 NCR: Mouse treated with different diet conditions |
Mus musculus |
Hippocampus |
Ncr |
|
Diet |
0, 12, 18, 6 |
Link |
| MOUSE DISTAL COLON HOOGERWERF 2008 WT: Microarray transcriptional profiling of mRNA expression in the mouse distal colon. |
Mus musculus |
Digestive |
Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE DISTAL CONVOLUTED TUBULE ZUBER 2009 WT: Circadian rhythms in the distal nephron segments, i.e., distal convoluted tubule (DCT) and connecting tubule (CNT) and the cortical collecting duct (CCD) |
Mus musculus |
Kidney |
Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE EPIDIDYMAL ADIPOSE ZHANG 2014 WT: Wild-type C57/BL6 mouse tissue microarray in the Circadian Atlas project. |
Mus musculus |
Adipose |
Wild-Type |
GSE54652 |
Control |
56, 42, 50, 60, 62, 64, 32, 24, 26, 20, 48, 46, 44, 28, 40, 52, 58, 38, 22, 54, 30, 36, 34, 18 |
Link |
| MOUSE FETAL KIDNEY DAN 2020 WT: Examination of RNA-seq time series of developing fetal mouse kidnes from embryonic ages E18 to E20.5 (inclusive) |
Mus musculus |
Kidney |
Wild-Type |
|
Control |
24, 12, 20, 48, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| MOUSE FIBROBLAST GRECO 2018 AHCY-KO: RNA-Seq Mouse Embryonic Fibroblast comparing Wild-Type to AHCY Knock-Out |
Mus musculus |
Cells |
Ahcy-KO |
|
Knock-Out |
24, 12, 20, 16, 32, 28 |
Link |
| MOUSE FIBROBLAST GRECO 2018 WT: RNA-Seq Mouse Embryonic Fibroblast comparing Wild-Type to AHCY Knock-Out |
Mus musculus |
Cells |
Wild-Type |
|
Control |
24, 12, 20, 16, 32, 28 |
Link |
| MOUSE HEART GAUCHER 2022 HYPOXIC: Normoxic and Hypoxic mice, experiments done in the liver, kidney, and heart |
Mus musculus |
Heart |
Hypoxic |
|
Oxygen-Level |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE HEART GAUCHER 2022 NORMOXIC: Normoxic and Hypoxic mice, experiments done in the liver, kidney, and heart |
Mus musculus |
Heart |
Normoxic |
|
Oxygen-Level |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE HEART ZHANG 2014 WT: Wild-type C57/BL6 mouse tissue microarray in the Circadian Atlas project. |
Mus musculus |
Heart |
Wild-Type |
GSE54652 |
Control |
56, 42, 50, 60, 62, 64, 32, 24, 26, 20, 48, 46, 44, 28, 40, 52, 58, 38, 22, 54, 30, 36, 34, 18 |
Link |
| MOUSE HEPACTIC ALBCRE HYPOXIA: Transcriptional response of HIF1a, and Bmal1 Knock-Out in hypoxia and normoxia |
Mus musculus |
Liver |
Hypoxia |
GSE254438 |
Knock-Out, Oxygen-Level |
4, 16 |
Link |
| MOUSE HEPACTIC ALBCRE NORMOXIA: Transcriptional response of HIF1a, and Bmal1 Knock-Out in hypoxia and normoxia |
Mus musculus |
Liver |
Normoxia |
GSE254438 |
Knock-Out, Oxygen-Level |
4, 16 |
Link |
| MOUSE HEPACTIC BMAL1 HYPOXIA: Transcriptional response of HIF1a, and Bmal1 Knock-Out in hypoxia and normoxia |
Mus musculus |
Liver |
Hypoxia |
GSE254438 |
Knock-Out, Oxygen-Level |
4, 16 |
Link |
| MOUSE HEPACTIC BMAL1 NORMOXIA: Transcriptional response of HIF1a, and Bmal1 Knock-Out in hypoxia and normoxia |
Mus musculus |
Liver |
Normoxia |
GSE254438 |
Knock-Out, Oxygen-Level |
4, 16 |
Link |
| MOUSE HEPACTIC HIF1A HYPOXIA: Transcriptional response of HIF1a, and Bmal1 Knock-Out in hypoxia and normoxia |
Mus musculus |
Liver |
Hypoxia |
GSE254438 |
Knock-Out, Oxygen-Level |
4, 16 |
Link |
| MOUSE HEPACTIC HIF1A NORMOXIA: Transcriptional response of HIF1a, and Bmal1 Knock-Out in hypoxia and normoxia |
Mus musculus |
Liver |
Normoxia |
GSE254438 |
Knock-Out, Oxygen-Level |
4, 16 |
Link |
| MOUSE HEPATOCYTE AD LIB GUAN 2020 KO: RNA sequencing in livers, isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, ATAC-seq in isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, single nuclei RNA-seq in control and adult hepatocytes REV-ERB a/b double knockout cell |
Mus musculus |
Liver |
KO |
|
Knock-Out |
10, 13, 22, 16, 19, 1, 4, 7 |
Link |
| MOUSE HEPATOCYTE AD LIB GUAN 2020 WT: RNA sequencing in livers, isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, ATAC-seq in isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, single nuclei RNA-seq in control and adult hepatocytes REV-ERB a/b double knockout cell |
Mus musculus |
Liver |
Wild-Type |
|
Control |
10, 13, 22, 16, 19, 1, 4, 7 |
Link |
| MOUSE HEPATOCYTE AND FEEDING KO AD-LIBITUM: Control of diurnal rhythms by the REV-ERBa and REV-ERBb KO and feeding. Analysis of gene expressions in different liver cell types. |
Mus musculus |
Liver |
Ad-Libitum |
GSE143524 |
Knock-Out, Diet |
10, 13, 22, 16, 19, 1, 4, 7 |
Link |
| MOUSE HEPATOCYTE AND FEEDING KO REVERSE-PHASE-FEEDING: Control of diurnal rhythms by the REV-ERBa and REV-ERBb KO and feeding. Analysis of gene expressions in different liver cell types. |
Mus musculus |
Liver |
Reverse-Phase-Feeding |
GSE143524 |
Knock-Out, Diet |
10, 13, 22, 16, 19, 1, 4, 7 |
Link |
| MOUSE HEPATOCYTE AND FEEDING WT AD-LIBITUM: Control of diurnal rhythms by the REV-ERBa and REV-ERBb KO and feeding. Analysis of gene expressions in different liver cell types. |
Mus musculus |
Liver |
Ad-Libitum |
GSE143524 |
Control, Diet |
10, 13, 22, 16, 19, 1, 4, 7 |
Link |
| MOUSE HEPATOCYTE AND FEEDING WT REVERSE-PHASE-FEEDING: Control of diurnal rhythms by the REV-ERBa and REV-ERBb KO and feeding. Analysis of gene expressions in different liver cell types. |
Mus musculus |
Liver |
Reverse-Phase-Feeding |
GSE143524 |
Control, Diet |
10, 13, 22, 16, 19, 1, 4, 7 |
Link |
| MOUSE HEPATOCYTE EC GUAN 2020 KO: RNA sequencing in livers, isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, ATAC-seq in isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, single nuclei RNA-seq in control and adult hepatocytes REV-ERB a/b double knockout cell |
Mus musculus |
Liver |
KO |
|
Knock-Out |
10, 4, 22, 16 |
Link |
| MOUSE HEPATOCYTE EC GUAN 2020 WT: RNA sequencing in livers, isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, ATAC-seq in isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, single nuclei RNA-seq in control and adult hepatocytes REV-ERB a/b double knockout cell |
Mus musculus |
Liver |
Wild-Type |
|
Control |
10, 4, 22, 16 |
Link |
| MOUSE HEPATOCYTE IN ENDOTHELIAL CELLS KO: Control of diurnal rhythms by the REV-ERBa and REV-ERBb Knock-Out and feeding. Analysis of gene expressions in different liver cell types. |
Mus musculus |
Liver |
KO |
GSE143524 |
Knock-Out |
10, 4, 22, 16 |
Link |
| MOUSE HEPATOCYTE IN ENDOTHELIAL CELLS WT: Control of diurnal rhythms by the REV-ERBa and REV-ERBb Knock-Out and feeding. Analysis of gene expressions in different liver cell types. |
Mus musculus |
Liver |
Wild-Type |
GSE143524 |
Control |
10, 4, 22, 16 |
Link |
| MOUSE HEPATOCYTE IN KUPFFER CELLS KO: Control of diurnal rhythms by the REV-ERBa and REV-ERBb Knock-Out and feeding. Analysis of gene expressions in different liver cell types. |
Mus musculus |
Liver |
KO |
GSE143524 |
Knock-Out |
10, 4, 22, 16 |
Link |
| MOUSE HEPATOCYTE IN KUPFFER CELLS WT: Control of diurnal rhythms by the REV-ERBa and REV-ERBb Knock-Out and feeding. Analysis of gene expressions in different liver cell types. |
Mus musculus |
Liver |
Wild-Type |
GSE143524 |
Control |
10, 4, 22, 16 |
Link |
| MOUSE HEPATOCYTE KC GUAN 2020 KO: RNA sequencing in livers, isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, ATAC-seq in isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, single nuclei RNA-seq in control and adult hepatocytes REV-ERB a/b double knockout cell |
Mus musculus |
Liver |
KO |
|
Knock-Out |
10, 4, 22, 16 |
Link |
| MOUSE HEPATOCYTE KC GUAN 2020 WT: RNA sequencing in livers, isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, ATAC-seq in isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, single nuclei RNA-seq in control and adult hepatocytes REV-ERB a/b double knockout cell |
Mus musculus |
Liver |
Wild-Type |
|
Control |
10, 4, 22, 16 |
Link |
| MOUSE HEPATOCYTE RPF GUAN 2020 KO: RNA sequencing in livers, isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, ATAC-seq in isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, single nuclei RNA-seq in control and adult hepatocytes REV-ERB a/b double knockout cell |
Mus musculus |
Liver |
KO |
|
Knock-Out |
10, 13, 22, 16, 19, 1, 4, 7 |
Link |
| MOUSE HEPATOCYTE RPF GUAN 2020 WT: RNA sequencing in livers, isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, ATAC-seq in isolated EC and KC of control and adult hepatocytes REV-ERB a/b double knockout cell, single nuclei RNA-seq in control and adult hepatocytes REV-ERB a/b double knockout cell |
Mus musculus |
Liver |
Wild-Type |
|
Control |
10, 13, 22, 16, 19, 1, 4, 7 |
Link |
| MOUSE HIGH FAT DIET KIDNEY 2021 HFK: RNASeq samples of two groups (normal chow vs HFD), three replicates, 6 time points for RNA-seq in GHTF |
Mus musculus |
Kidney |
Hfk |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE HIGH FAT DIET KIDNEY 2021 NCK: RNASeq samples of two groups (normal chow vs HFD), three replicates, 6 time points for RNA-seq in GHTF |
Mus musculus |
Kidney |
Nck |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE HYPOTHALAMUS ZHANG 2014 WT: Wild-type C57/BL6 mouse tissue microarray in the Circadian Atlas project. |
Mus musculus |
Brain |
Wild-Type |
GSE54652 |
Control |
56, 42, 50, 60, 62, 64, 32, 24, 26, 20, 48, 46, 44, 28, 40, 52, 58, 38, 22, 54, 30, 36, 34, 18 |
Link |
| MOUSE INTESTINAL EPITHELIA TOGNINI 2017 KETOGENIC-DIET: Intestinal epithelia microarray in a ketogenic diet vs. normal chow experiment. |
Mus musculus |
Digestive |
Ketogenic-Diet |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE INTESTINAL EPITHELIA TOGNINI 2017 NORMAL-CHOW: Intestinal epithelia microarray in a ketogenic diet vs. normal chow experiment. |
Mus musculus |
Digestive |
Normal-Chow |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE KIDNEY GAUCHER 2022 HYPOXIC: Normoxic and Hypoxic mice, experiments done in the liver, kidney, and heart |
Mus musculus |
Kidney |
Hypoxic |
|
Oxygen-Level |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE KIDNEY GAUCHER 2022 NORMOXIC: Normoxic and Hypoxic mice, experiments done in the liver, kidney, and heart |
Mus musculus |
Kidney |
Normoxic |
|
Oxygen-Level |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE KIDNEY ZHANG 2014 WT: Wild-type C57/BL6 mouse tissue microarray in the Circadian Atlas project. |
Mus musculus |
Kidney |
Wild-Type |
GSE54652 |
Control |
56, 42, 50, 60, 62, 64, 32, 24, 26, 20, 48, 46, 44, 28, 40, 52, 58, 38, 22, 54, 30, 36, 34, 18 |
Link |
| MOUSE LIVER CLOCK KNOCKOUT AD LIBITUM PAOLO 2019 KO: |
Mus musculus |
Liver |
KO |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER CLOCK KNOCKOUT AD LIBITUM PAOLO 2019 RE: |
Mus musculus |
Liver |
Re |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER CLOCK KNOCKOUT AD LIBITUM PAOLO 2019 WT: |
Mus musculus |
Liver |
Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER CLOCK KNOCKOUT TRF PAOLO 2019 KO: |
Mus musculus |
Liver |
KO |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER CLOCK KNOCKOUT TRF PAOLO 2019 RE: |
Mus musculus |
Liver |
Re |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER CLOCK KNOCKOUT TRF PAOLO 2019 WT: |
Mus musculus |
Liver |
Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER ECKEL MAHAN 2022 KO: Inducible insulin receptor knockout mice to look at hepatic gene expression around the circadian clock |
Mus musculus |
Liver |
KO |
|
Knock-Out |
24, 12, 20, 16, 0, 2, 4, 8 |
Link |
| MOUSE LIVER ECKEL MAHAN 2022 WT: Inducible insulin receptor knockout mice to look at hepatic gene expression around the circadian clock |
Mus musculus |
Liver |
Wild-Type |
|
Control |
24, 12, 20, 16, 0, 2, 4, 8 |
Link |
| MOUSE LIVER ECKEL-MAHAN 2013 HIGH-FAT: Investigating widespread remodeling of the liver clock generated by high-fat diet. |
Mus musculus |
Liver |
High-Fat |
GSE52333 |
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER ECKEL-MAHAN 2013 NORMAL-CHOW: Investigating widespread remodeling of the liver clock generated by high-fat diet. |
Mus musculus |
Liver |
Normal-Chow |
GSE52333 |
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER GAUCHER 2018 CHRONIC-ETOH: Liver RNASeq chronically treated with ethanol |
Mus musculus |
Liver |
Chronic-Etoh |
|
Drug Treatment |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER GAUCHER 2018 WT: Liver RNASeq chronically treated with ethanol |
Mus musculus |
Liver |
Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER GAUCHER 2022 HYPOXIC: Normoxic and Hypoxic mice, experiments done in the liver, kidney, and heart |
Mus musculus |
Liver |
Hypoxic |
|
Oxygen-Level |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER GAUCHER 2022 NORMOXIC: Normoxic and Hypoxic mice, experiments done in the liver, kidney, and heart |
Mus musculus |
Liver |
Normoxic |
|
Oxygen-Level |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER HUGHES 2009 WT: Circadian microarray of mouse liver over a 48 hour time course |
Mus musculus |
Liver |
Wild-Type |
|
Control |
42, 48, 43, 24, 25, 26, 27, 20, 21, 22, 23, 46, 47, 44, 45, 28, 29, 40, 41, 1, 3, 2, 5, 4, 7, 6, 9, 8, 39, 38, 11, 10, 13, 12, 15, 14, 17, 16, 19, 18, 31, 30, 37, 36, 35, 34, 33, 32 |
Link |
| MOUSE LIVER KINOUCHI 2018 FASTING: Liver RNASeq in a fasting condition |
Mus musculus |
Liver |
Fasting |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER KINOUCHI 2018 NORMAL-CHOW: Liver RNASeq in a fasting condition |
Mus musculus |
Liver |
Normal-Chow |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER MASRI 2014 SIRT1-KO: Genomic partitioning by two independent sirtuins contributes to differential control of circadian metabolism. |
Mus musculus |
Liver |
Sirt1-KO |
GSE57830 |
Knock-Out |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER MASRI 2014 SIRT1-WT: Genomic partitioning by two independent sirtuins contributes to differential control of circadian metabolism. |
Mus musculus |
Liver |
Sirt1-Wild-Type |
GSE57830 |
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER MASRI 2014 SIRT6-KO: Genomic partitioning by two independent sirtuins contributes to differential control of circadian metabolism. |
Mus musculus |
Liver |
Sirt6-KO |
GSE54652 |
Knock-Out |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER MASRI 2014 SIRT6-WT: Genomic partitioning by two independent sirtuins contributes to differential control of circadian metabolism. |
Mus musculus |
Liver |
Sirt6-Wild-Type |
GSE54652 |
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER MASRI 2016 LUNG-WT: Lung adenocarcinoma operates as an endogenous reorganizer of circadian metabolism. |
Mus musculus |
Liver |
Lung-Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER MASRI 2016 TUMOR-BEARING-LUNG: Lung adenocarcinoma operates as an endogenous reorganizer of circadian metabolism. |
Mus musculus |
Liver |
Tumor-Bearing-Lung |
|
Cancer |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER MILLER 2007 WT: Mouse Wild Type Liver Transcriptome |
Mus musculus |
Liver |
Wild-Type |
|
Control |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| MOUSE LIVER MUSCLE DUB RE LIVER LMRE: Liver muscle double KO and RE of genes |
Mus musculus |
Liver |
Lmre |
|
Knock-Out |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER MUSCLE DUB RE LIVER WT DUB: Liver muscle double KO and RE of genes |
Mus musculus |
Liver |
Dub |
|
Knock-Out |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER MUSCLE DUB RE MUS LMRE: Liver muscle double KO and RE of genes |
Mus musculus |
Muscle |
Lmre |
|
Knock-Out |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER MUSCLE DUB RE MUS WT DUB: Liver muscle double KO and RE of genes |
Mus musculus |
Muscle |
Dub |
|
Knock-Out |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER NAN 2018 LIBRAMED-TREATMENT: Liver RNASeq in an experiment treated with the drug Libramed |
Mus musculus |
Liver |
Libramed-Treatment |
|
Drug Treatment |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER NAN 2018 WT: Liver RNASeq in an experiment treated with the drug Libramed |
Mus musculus |
Liver |
Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER PANDA 2002 WT: Gene expression profiling to identify cycling transcripts in the SCN and in the liver |
Mus musculus |
Liver |
Wild-Type |
|
Control |
38, 58, 46, 54, 30, 42, 50, 34, 62, 74, 66, 70 |
Link |
| MOUSE LIVER PETRUS 2020 CONTROL-DARK: Mouse treated with different diet conditions and different feeding conditions. |
Mus musculus |
Liver |
Control-Dark |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER PETRUS 2020 CONTROL-LIGHT: Mouse treated with different diet conditions and different feeding conditions. |
Mus musculus |
Liver |
Control-Light |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER PETRUS 2020 TRYPTOPHAN-DARK: Mouse treated with different diet conditions and different feeding conditions. |
Mus musculus |
Liver |
Tryptophan-Dark |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER PETRUS 2020 TRYPTOPHAN-LIGHT: Mouse treated with different diet conditions and different feeding conditions. |
Mus musculus |
Liver |
Tryptophan-Light |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER RESTRICTED FEEDING AD-LIB: Circadian gene expression in brown adipose tissue (BAT) and liver under the following five conditions: ad libitum (AL); temporally restricted during the dark phase (TR-night) or light phase (TR-day); and calorically restricted during the dark phase (CR-night) or light phase (CR-day) |
Mus musculus |
Liver |
Ad-Lib |
GSE266543 |
Diet |
24, 12, 20, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| MOUSE LIVER RESTRICTED FEEDING CR-DAY: Circadian gene expression in brown adipose tissue (BAT) and liver under the following five conditions: ad libitum (AL); temporally restricted during the dark phase (TR-night) or light phase (TR-day); and calorically restricted during the dark phase (CR-night) or light phase (CR-day) |
Mus musculus |
Liver |
Cr-Day |
GSE266543 |
Diet |
24, 12, 20, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| MOUSE LIVER RESTRICTED FEEDING CR-NIGHT: Circadian gene expression in brown adipose tissue (BAT) and liver under the following five conditions: ad libitum (AL); temporally restricted during the dark phase (TR-night) or light phase (TR-day); and calorically restricted during the dark phase (CR-night) or light phase (CR-day) |
Mus musculus |
Liver |
Cr-Night |
GSE266543 |
Diet |
24, 12, 20, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| MOUSE LIVER RESTRICTED FEEDING TR-DAY: Circadian gene expression in brown adipose tissue (BAT) and liver under the following five conditions: ad libitum (AL); temporally restricted during the dark phase (TR-night) or light phase (TR-day); and calorically restricted during the dark phase (CR-night) or light phase (CR-day) |
Mus musculus |
Liver |
Tr-Day |
GSE266543 |
Diet |
24, 12, 20, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| MOUSE LIVER RESTRICTED FEEDING TR-NIGHT: Circadian gene expression in brown adipose tissue (BAT) and liver under the following five conditions: ad libitum (AL); temporally restricted during the dark phase (TR-night) or light phase (TR-day); and calorically restricted during the dark phase (CR-night) or light phase (CR-day) |
Mus musculus |
Liver |
Tr-Night |
GSE266543 |
Diet |
24, 12, 20, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| MOUSE LIVER SASSONE ILLUMINA KO: Liver RNASeq with KO of all clock genes, and RE of just Liver Clock |
Mus musculus |
Liver |
KO |
|
Knock-Out |
NA |
Link |
| MOUSE LIVER SASSONE ILLUMINA RE: Liver RNASeq with KO of all clock genes, and RE of just Liver Clock |
Mus musculus |
Liver |
Re |
|
Knock-Out |
NA |
Link |
| MOUSE LIVER SCN RE KO: RNASeq of liver in WT, Bmal1 KO and SCN-RE mice |
Mus musculus |
Liver |
KO |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER SCN RE RE: RNASeq of liver in WT, Bmal1 KO and SCN-RE mice |
Mus musculus |
Liver |
Re |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER SCN RE WT: RNASeq of liver in WT, Bmal1 KO and SCN-RE mice |
Mus musculus |
Liver |
Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER TERAJIMA 2017 ADARB1-KO: Identification A-to-I RNA editing as a key mechanism of post-transcriptional regulation in the circadian clockwork. |
Mus musculus |
Liver |
Adarb1-KO |
|
Knock-Out |
10, 14, 22, 18, 2, 6 |
Link |
| MOUSE LIVER TERAJIMA 2017 WT: Identification A-to-I RNA editing as a key mechanism of post-transcriptional regulation in the circadian clockwork. |
Mus musculus |
Liver |
Wild-Type |
|
Control |
10, 14, 22, 18, 2, 6 |
Link |
| MOUSE LIVER TOGNINI 2017 KETOGENIC-DIET: Liver microarray in a ketogenic diet vs. normal chow experiment. |
Mus musculus |
Liver |
Ketogenic-Diet |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER TOGNINI 2017 NORMAL-CHOW: Liver microarray in a ketogenic diet vs. normal chow experiment. |
Mus musculus |
Liver |
Normal-Chow |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE LIVER ZHANG 2014 WT: Wild-type C57/BL6 mouse tissue microarray in the Circadian Atlas project. |
Mus musculus |
Liver |
Wild-Type |
GSE54652 |
Control |
56, 42, 50, 60, 62, 64, 32, 24, 26, 20, 48, 46, 44, 28, 40, 52, 58, 38, 22, 54, 30, 36, 34, 18 |
Link |
| MOUSE LUNG ZHANG 2014 WT: Wild-type C57/BL6 mouse tissue microarray in the Circadian Atlas project. |
Mus musculus |
Lung |
Wild-Type |
GSE54652 |
Control |
56, 42, 50, 60, 62, 64, 32, 24, 26, 20, 48, 46, 44, 28, 40, 52, 58, 38, 22, 54, 30, 36, 34, 18 |
Link |
| MOUSE MACROPHAGES KELLER 2009 DARK: Macrophages in all dark. |
Mus musculus |
Cells |
Dark |
|
Control |
24, 12, 20, 16, 32, 44, 28, 36, 40, 0, 4, 8 |
Link |
| MOUSE MEF GRECO 2018 DMSO: |
Mus musculus |
Cells |
Dmso |
|
Control |
24, 12 |
Link |
| MOUSE MEF GRECO 2018 DZNEP: |
Mus musculus |
Cells |
Dznep |
|
Control |
24, 12 |
Link |
| MOUSE MUSCLE ANDREWS 2010 WT: Skeletal muscle with Bmal1(-/-) condition |
Mus musculus |
Muscle |
Wild-Type |
|
Control |
26, 38, 58, 22, 46, 18, 30, 42, 50, 34, 62, 54 |
Link |
| MOUSE MUSCLE GASTROCNEMIUS ZHANG 2014 WT: Wild-type C57/BL6 mouse tissue microarray in the Circadian Atlas project. |
Mus musculus |
Muscle |
Wild-Type |
GSE54652 |
Control |
56, 42, 50, 60, 62, 64, 32, 24, 26, 20, 48, 46, 44, 28, 40, 52, 58, 38, 22, 54, 30, 36, 34, 18 |
Link |
| MOUSE MUSCLE KINOUCHI 2018 FASTING: Muscle RNASeq in a fasting condition |
Mus musculus |
Muscle |
Fasting |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE MUSCLE KINOUCHI 2018 NORMAL-CHOW: Muscle RNASeq in a fasting condition |
Mus musculus |
Muscle |
Normal-Chow |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE NIGHT FEEDING KO: RNASeq of liver in WT and Bmal1 KO mice under night feeding condition |
Mus musculus |
Liver |
KO |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE NIGHT FEEDING WT: RNASeq of liver in WT and Bmal1 KO mice under night feeding condition |
Mus musculus |
Liver |
Wild-Type |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE PITUITARY ZHANG 2014 WT: Wild-type C57/BL6 mouse tissue microarray in the Circadian Atlas project. |
Mus musculus |
Glands |
Wild-Type |
GSE54652 |
Control |
42, 48, 43, 24, 25, 26, 27, 20, 21, 22, 23, 46, 47, 44, 45, 28, 29, 40, 41, 1, 3, 2, 5, 4, 7, 6, 9, 8, 39, 38, 11, 10, 13, 12, 15, 14, 17, 16, 19, 18, 31, 30, 37, 36, 35, 34, 33, 32 |
Link |
| MOUSE SCN CONTROL: |
Mus musculus |
Brain |
Control |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE SCN DZNEP: RNASeq of SCN in a DZnep treatment experiment |
Mus musculus |
Brain |
Dznep |
|
Control |
9, 3, 15, 21 |
Link |
| MOUSE SCN HIGH-FAT: |
Mus musculus |
Brain |
High-Fat |
|
Control |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE SCN PETRUS 2020 CONTROL-DARK: Mouse treated with different diet conditions and different feeding conditions. |
Mus musculus |
Brain |
Control-Dark |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE SCN PETRUS 2020 CONTROL-LIGHT: Mouse treated with different diet conditions and different feeding conditions. |
Mus musculus |
Brain |
Control-Light |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE SCN PETRUS 2020 TRYPTOPHAN-DARK: Mouse treated with different diet conditions and different feeding conditions. |
Mus musculus |
Brain |
Tryptophan-Dark |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE SCN PETRUS 2020 TRYPTOPHAN-LIGHT: Mouse treated with different diet conditions and different feeding conditions. |
Mus musculus |
Brain |
Tryptophan-Light |
|
Diet |
12, 20, 16, 0, 4, 8 |
Link |
| MOUSE SCN SALINE WT: RNASeq of SCN in a saline treatment experiment |
Mus musculus |
Brain |
Wild-Type |
|
Control |
9, 3, 15, 21 |
Link |
| MOUSE SKELETAL MUSCLE NA 2018 SIRT1-KO: Skeletal muscle RNASeq in a Sirt1KO experiment via a cre-lox system |
Mus musculus |
Muscle |
Sirt1-KO |
|
Knock-Out |
19, 25, 13, 7 |
Link |
| MOUSE SKELETAL MUSCLE NA 2018 WT: Skeletal muscle RNASeq in a Sirt1KO experiment via a cre-lox system |
Mus musculus |
Muscle |
Wild-Type |
|
Control |
19, 25, 13, 7 |
Link |
| MOUSE STRIATUM NA 2020 COCAINE-D2R-KO: RNASeq of striatum in a cocaine treatment experiment with D2R Knock-Out |
Mus musculus |
Brain |
Cocaine-D2R-KO |
GSE142657 |
Drug Treatment |
11, 15, 23, 19, 3, 7 |
Link |
| MOUSE STRIATUM NA 2020 COCAINE.: RNASeq of striatum in a cocaine treatment experiment with D2R Knock-Out |
Mus musculus |
Brain |
Cocaine. |
GSE142657 |
Drug Treatment |
11, 15, 23, 19, 3, 7 |
Link |
| MOUSE STRIATUM NA 2020 D2R-KO.: RNASeq of striatum in a cocaine treatment experiment with D2R Knock-Out |
Mus musculus |
Brain |
D2R-KO. |
GSE142657 |
Drug Treatment |
11, 15, 23, 19, 3, 7 |
Link |
| MOUSE STRIATUM NA 2020 WT: RNASeq of striatum in a cocaine treatment experiment with D2R Knock-Out |
Mus musculus |
Brain |
Wild-Type |
GSE142657 |
Control |
11, 15, 23, 19, 3, 7 |
Link |
| MOUSE SUPRACHIASMATIC NUCLEUS BALLANCE 2015 WT: Circadian RNA expression profile of the mammalian biological clock, the suprachiasmatic nucleus (SCN) in C57/BL6 mice, at 2-hour resolution using microarrays. |
Mus musculus |
Brain |
Wild-Type |
|
Control |
56, 42, 50, 60, 62, 64, 32, 24, 26, 20, 48, 46, 44, 28, 40, 52, 58, 38, 22, 54, 30, 36, 34, 18 |
Link |
| MOUSE SUPRACHIASMATIC NUCLEUS PANDA 2002 WT: Gene expression profiling to identify cycling transcripts in the SCN and in the liver |
Mus musculus |
Brain |
Wild-Type |
|
Control |
26, 38, 58, 22, 18, 30, 42, 50, 34, 62, 54 |
Link |
| MOUSE SYNTHESIS AND DEGRADATION EXON KO: Rhythmic RNA synthesis and rhythmic degradation and their importance on 24-h and 12-h RNA rhythms. These rhythms were predominantly regulated by Bmal1 and/or the core clock mechanism |
Mus musculus |
Cells |
KO |
GSE253826 |
Knock-Out |
24, 26, 38, 46, 32, 44, 30, 28, 36, 40, 34, 42 |
Link |
| MOUSE SYNTHESIS AND DEGRADATION EXON WT: Rhythmic RNA synthesis and rhythmic degradation and their importance on 24-h and 12-h RNA rhythms. These rhythms were predominantly regulated by Bmal1 and/or the core clock mechanism |
Mus musculus |
Cells |
Wild-Type |
GSE253826 |
Control |
24, 26, 38, 46, 32, 44, 30, 28, 36, 40, 34, 42 |
Link |
| MOUSE SYNTHESIS AND DEGRADATION INTRON KO: Rhythmic RNA synthesis and rhythmic degradation and their importance on 24-h and 12-h RNA rhythms. These rhythms were predominantly regulated by Bmal1 and/or the core clock mechanism |
Mus musculus |
Cells |
KO |
GSE253826 |
Knock-Out |
24, 26, 38, 46, 32, 44, 30, 28, 36, 40, 34, 42 |
Link |
| MOUSE SYNTHESIS AND DEGRADATION INTRON WT: Rhythmic RNA synthesis and rhythmic degradation and their importance on 24-h and 12-h RNA rhythms. These rhythms were predominantly regulated by Bmal1 and/or the core clock mechanism |
Mus musculus |
Cells |
Wild-Type |
GSE253826 |
Control |
24, 26, 38, 46, 32, 44, 30, 28, 36, 40, 34, 42 |
Link |
| MOUSE TRANSCRIPTOME EVENING-EXERCISE: Transcriptomic data for mouse exercise in light dark conditions. |
Mus musculus |
Liver |
Evening-Exercise |
|
Exercise |
24, 12, 20, 16, 4, 8 |
Link |
| MOUSE TRANSCRIPTOME EVENING-SEDENTARY: Transcriptomic data for mouse exercise in light dark conditions. |
Mus musculus |
Liver |
Evening-Sedentary |
|
Exercise |
24, 12, 20, 16, 4, 8 |
Link |
| MOUSE TRANSCRIPTOME MORNING-EXERCISE: Transcriptomic data for mouse exercise in light dark conditions. |
Mus musculus |
Liver |
Morning-Exercise |
|
Exercise |
24, 12, 20, 16, 4, 8 |
Link |
| MOUSE TRANSCRIPTOME MORNING-SEDENTARY: Transcriptomic data for mouse exercise in light dark conditions. |
Mus musculus |
Liver |
Morning-Sedentary |
|
Exercise |
24, 12, 20, 16, 4, 8 |
Link |
| MOUSE VENTRAL HIPPOCAMPUS KONRAD 2017 TEMPORAL-LOBE-EPILEPTIC: Hippocampus RNASeq in an experiment comparing epileptic vs normal brain. |
Mus musculus |
Brain |
Temporal-Lobe-Epileptic |
GSE54652 |
Disease |
11, 15, 23, 19, 3, 7 |
Link |
| MOUSE VENTRAL HIPPOCAMPUS KONRAD 2017 WT: Hippocampus RNASeq in an experiment comparing epileptic vs normal brain. |
Mus musculus |
Brain |
Wild-Type |
GSE54652 |
Control |
11, 15, 23, 19, 3, 7 |
Link |
| NEUROSPORA CRASSA ANANTHASUBRAMANIAM 2018 DMSN1: Sampling of liquid culture grown N. crassa every 2h over 22h in the dark from light to dark transition. |
Neurospora crassa |
Cells |
Dmsn1 |
|
Light-Dark |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| NEUROSPORA CRASSA ANANTHASUBRAMANIAM 2018 WT: Sampling of liquid culture grown N. crassa every 2h over 22h in the dark from light to dark transition. |
Neurospora crassa |
Cells |
Wild-Type |
|
Control |
10, 12, 20, 14, 22, 16, 18, 0, 2, 4, 6, 8 |
Link |
| NEUROSPORA GCN2 SIGNALING PATHWAY KO: GCN2 signaling pathway in circadian clock function by regulating histone acetylation under amino acid starvation. |
Neurospora crassa |
Cells |
KO |
GSE220169 |
Knock-Out |
0, 12 |
Link |
| NEUROSPORA GCN2 SIGNALING PATHWAY WT: GCN2 signaling pathway in circadian clock function by regulating histone acetylation under amino acid starvation. |
Neurospora crassa |
Cells |
Wild-Type |
GSE220169 |
Control |
0, 12 |
Link |
| RAT BRAIN STAEHLE 2020 CEA-WT: High-throughput qRT-PCR profiling of 145 genes using Fluidigm's 96.96 array. Bilateral samples from a single animal were considered as one sample. There was no inter-animal pooling of samples |
Rattus norvegicus |
Brain |
Cea-Wild-Type |
|
Control |
9, 3, 5 |
Link |
| RAT BRAIN STAEHLE 2020 DVC-WT: High-throughput qRT-PCR profiling of 145 genes using Fluidigm's 96.96 array. Bilateral samples from a single animal were considered as one sample. There was no inter-animal pooling of samples |
Rattus norvegicus |
Brain |
Dvc-Wild-Type |
|
Control |
9, 3, 5 |
Link |
| RAT LIVER ALMON 2008 WT: Global gene expression analysis in the identification of circadian-regulated genes involved in drug action. |
Rattus norvegicus |
Liver |
Wild-Type |
GSE8988 |
Control |
11, 10, 13, 12, 20, 14, 22, 16, 24, 18, 23, 1, 2, 4, 6, 8 |
Link |
| RAT SLEEP AND BRAIN DISORDERS SLEEP-DEPRIVED: Sleep deprivation in Long Evans rats were subjects being sleep deprived for 6 hours and then samples being collected every 2h during the recovery. |
Rattus norvegicus |
Brain |
Sleep-Deprived |
GSE250324 |
Sleep |
0, 2, 4, 8 |
Link |
| RAT SLEEP AND BRAIN DISORDERS WT: Sleep deprivation in Long Evans rats were subjects being sleep deprived for 6 hours and then samples being collected every 2h during the recovery. |
Rattus norvegicus |
Brain |
Wild-Type |
GSE250324 |
Control |
0, 2, 4, 8 |
Link |
| SIFUENTES ZEBRAFISH 2016 INJURY: Transcriptional profiles of 0, 8, and 16 hour post-lesion zebrafish Muller glia (in triplicate) were generated by high-throughput sequencing in an Illumina GAIIx |
Danio rerio |
Eye |
Injury |
|
Injury |
0, 16, 8 |
Link |
| SLEEP DISRUPTION AND AGING FOREBRAIN SLEEP-DEPRIVED: Property of circadian-affected tissue-specific genes in cerebellum, forebrain, liver, kidney, and their link to aging and longevity. |
Mus musculus |
Brain |
Sleep-Deprived |
GSE240693 |
Sleep |
12, 20, 16, 0, 4, 8 |
Link |
| SLEEP DISRUPTION AND AGING FOREBRAIN WT: Property of circadian-affected tissue-specific genes in cerebellum, forebrain, liver, kidney, and their link to aging and longevity. |
Mus musculus |
Brain |
Wild-Type |
GSE240693 |
Control |
12, 20, 16, 0, 4, 8 |
Link |
| SLEEP DISRUPTION AND AGING IN CEREBELLUM SLEEP-DEPRIVED: Property of circadian-affected tissue-specific genes in cerebellum, forebrain, liver, kidney, and their link to aging and longevity. |
Mus musculus |
Brain |
Sleep-Deprived |
GSE240693 |
Sleep |
12, 20, 16, 0, 4, 8 |
Link |
| SLEEP DISRUPTION AND AGING IN CEREBELLUM WT: Property of circadian-affected tissue-specific genes in cerebellum, forebrain, liver, kidney, and their link to aging and longevity. |
Mus musculus |
Brain |
Wild-Type |
GSE240693 |
Control |
12, 20, 16, 0, 4, 8 |
Link |
| SLEEP DISRUPTION AND AGING IN KIDNEY SLEEP-DEPRIVED: Property of circadian-affected tissue-specific genes in cerebellum, forebrain, liver, kidney, and their link to aging and longevity. |
Mus musculus |
Kidney |
Sleep-Deprived |
GSE240693 |
Sleep |
12, 20, 16, 0, 4, 8 |
Link |
| SLEEP DISRUPTION AND AGING IN KIDNEY WT: Property of circadian-affected tissue-specific genes in cerebellum, forebrain, liver, kidney, and their link to aging and longevity. |
Mus musculus |
Kidney |
Wild-Type |
GSE240693 |
Control |
12, 20, 16, 0, 4, 8 |
Link |
| SLEEP DISRUPTION AND AGING IN LIVER SLEEP-DEPRIVED: Property of circadian-affected tissue-specific genes in cerebellum, forebrain, liver, kidney, and their link to aging and longevity. |
Mus musculus |
Liver |
Sleep-Deprived |
GSE240693 |
Sleep |
12, 20, 16, 0, 4, 8 |
Link |
| SLEEP DISRUPTION AND AGING IN LIVER WT: Property of circadian-affected tissue-specific genes in cerebellum, forebrain, liver, kidney, and their link to aging and longevity. |
Mus musculus |
Liver |
Wild-Type |
GSE240693 |
Control |
12, 20, 16, 0, 4, 8 |
Link |
| TEMPERATURE CHANGE AND CIRC RHYTHM 18C: mRNA expression level of the fat body from Drosophila melanogaster following a step change from 25C to 18C |
Drosophila melanogaster |
Fat Body |
18c |
GSE241002 |
Temperature |
114, 88, 110, 112, 82, 80, 86, 84, 24, 26, 20, 22, 28, 0, 2, 4, 6, 8, 78, 98, 108, 102, 90, 100, 92, 106, 94, 104, 96, 10, 12, 14, 16, 32, 30, 36, 34 |
Link |
| TEMPERATURE CHANGE AND CIRC RHYTHM 18C,HIGH-CALORIE: mRNA expression level of the fat body from Drosophila melanogaster following a step change from 25C to 18C |
Drosophila melanogaster |
Fat Body |
18c,high-Calorie |
GSE241003 |
Diet, Temperature |
24, 10, 12, 20, 14, 22, 16, 18, 2, 4, 6, 8 |
Link |
| TEMPERATURE CHANGE AND CIRC RHYTHM 18C,LOW-CALORIE: mRNA expression level of the fat body from Drosophila melanogaster following a step change from 25C to 18C |
Drosophila melanogaster |
Fat Body |
18c,low-Calorie |
GSE241003 |
Diet, Temperature |
24, 10, 12, 20, 14, 22, 16, 18, 2, 4, 6, 8 |
Link |
| TEMPERATURE CHANGE AND CIRC RHYTHM 25C: mRNA expression level of the fat body from Drosophila melanogaster following a step change from 25C to 18C |
Drosophila melanogaster |
Fat Body |
25c |
GSE241002 |
Temperature |
114, 88, 110, 112, 82, 80, 86, 84, 24, 26, 20, 22, 28, 0, 2, 4, 6, 8, 78, 98, 108, 102, 90, 100, 92, 106, 94, 104, 96, 10, 12, 14, 16, 32, 30, 36, 34 |
Link |
| TEMPERATURE CHANGE AND CIRC RHYTHM 25C,HIGH-CALORIE: mRNA expression level of the fat body from Drosophila melanogaster following a step change from 25C to 18C |
Drosophila melanogaster |
Fat Body |
25c,high-Calorie |
GSE241003 |
Diet, Temperature |
24, 10, 12, 20, 14, 22, 16, 18, 2, 4, 6, 8 |
Link |
| TOVIN ZEBRAFISH 2012 KO: Adult (0.5-1.5 years old) transgenic zebrafish, Tg(aanat2:EGFP)Y8, which express enhanced green fluorescent protein (EGFP) in the pineal gland under the control of the aanat2 regulatory regions, were used. Fish were raised under 12-hr light:12-hr dark (LD) cycles, in a temperature controlled room, and transferred to constant darkness (DD) for tissue collection. |
Danio rerio |
Glands |
KO |
|
Knock-Out |
10, 14, 22, 18, 2, 6 |
Link |
| VISION AND CIRCADIAN BIOLOGY CHOROIDAL MYOPIC: Examining the role of circadian biology in myopia by analyzing gene expression in the retina and choroid of chicks, comparing the myopic (occluded) eye to the contralateral control (open) eye |
Gallus gallus |
Eye |
Myopic |
GSE261232 |
Disease |
12, 20, 16, 0, 4, 8 |
Link |
| VISION AND CIRCADIAN BIOLOGY CHOROIDAL WT: Examining the role of circadian biology in myopia by analyzing gene expression in the retina and choroid of chicks, comparing the myopic (occluded) eye to the contralateral control (open) eye |
Gallus gallus |
Eye |
Wild-Type |
GSE261232 |
Control |
12, 20, 16, 0, 4, 8 |
Link |
| VISION AND CIRCADIAN BIOLOGY RETINAL MYOPIC: Examining the role of circadian biology in myopia by analyzing gene expression in the retina and choroid of chicks, comparing the myopic (occluded) eye to the contralateral control (open) eye |
Gallus gallus |
Eye |
Myopic |
GSE261232 |
Disease |
12, 20, 16, 0, 4, 8 |
Link |
| VISION AND CIRCADIAN BIOLOGY RETINAL WT: Examining the role of circadian biology in myopia by analyzing gene expression in the retina and choroid of chicks, comparing the myopic (occluded) eye to the contralateral control (open) eye |
Gallus gallus |
Eye |
Wild-Type |
GSE261232 |
Control |
12, 20, 16, 0, 4, 8 |
Link |